Accession
MI0005067
Description
Bos taurus
bta-mir-25 precursor miRNA
Literature search
20 open access papers mention bta-mir-25
(55 sentences)
(55 sentences)
Sequence
239342
reads,
2067
reads per million, 76 experiments
ggccaguguugagaggcggagacuugggcaauugcuggacgcugccccgggCAUUGCACUUGUCUCGGUCUGAcagugccggcc
((((.((((((..((((.(((((..(.(((((..((((........))))..))))).)..))))).))))..)))))).))))
((((.((((((..((((.(((((..(.(((((..((((........))))..))))).)..))))).))))..)))))).))))
Structure
a ag g uu g ug acg
ggcc guguug aggc gagac g gcaau cugg c
|||| |||||| |||| ||||| | ||||| ||||
ccgg cgugac UCUG CUCUG C CGUUA ggcc u
c AG G UU A Cg ccg
Annotation confidence
Medium
Do you think this miRNA is real?
Comments
The mature miR-25 sequence identified by Coutinho et al [1] has an additional A base at the 5' end, which conflicts with the draft genome sequence.
Genome context
chr25: 37072717-37072800 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from bta-mir-25
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bta-miR-25
| Accession | MIMAT0003853 |
| Description | Bos taurus bta-miR-25 mature miRNA |
| Sequence | 52 - CAUUGCACUUGUCUCGGUCUGA - 73 |
| Evidence |
experimental
cloned [1-2], Array [3], qRT-PCR [3] |
References
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