Stem-loop sme-mir-751

Accession

MI0005177

Description

Schmidtea mediterranea sme-mir-751 precursor miRNA

Sequence

140510 reads, 2436.0 reads per million, 28 experiments

acuaauuuuguuuucuuguaaacuccgauagaaugauucauaagauugacuauaaaaCAUGUUUGAAUGGCCAUGACAaaguauu
....((((((((......(((((....((((......(((......))))))).......))))).........))))))))...

Structure

acua        ---uucuug     ---uccg    aaugau   ua 
    auuuuguu         uaaac       auag      uca  a
    ||||||||         |||||       ||||      |||   
    ugaaACAG         GUUUG       uauc      agu  g
-uua        UACCGGUAA     UACaaaa    ------   ua 

Annotation confidence Not enough data

Genome context

gb|NNSW01000027.1|: 4369889-4369973 [-]

Mature sme-miR-751-3p

• Accession: MIMAT0004018
• Description: Schmidtea mediterranea sme-miR-751-3p mature miRNA
• Sequence: 58 - CAUGUUUGAAUGGCCAUGACA - 78
• Evidence: experimental ; cloned [1], 454 [2], Illumina [2]

References

1. PubMed ID: 16849698
   MicroRNAs from the Planarian Schmidtea mediterranea: a model system for stem cell biology
   "Palakodeti D, Smielewska M, Graveley BR"
   "RNA (2006) 12:1640-1649


2. PubMed ID: 19564616
   High-resolution profiling and discovery of planarian small RNAs
   "Friedlander MR, Adamidi C, Han T, Lebedeva S, Isenbarger TA, Hirst M, Marra M, Nusbaum C, Lee WL, Jenkin JC, Sanchez Alvarado A, Kim JK, Rajewsky N"
   "Proc Natl Acad Sci U S A (2009) 106:11546-11551