Accession
MI0005381
Description
Arabidopsis thaliana
ath-MIR825 precursor miRNA MIR825
Gene
family?
family?
RF03826;
MIR825
Literature search
4 open access papers mention ath-MIR825
(4 sentences)
(4 sentences)
Sequence
35018
reads,
134.0
reads per million, 181 experiments
cuuucuauaauuacuuuuuguauagaauucacuaguugauuccaucgacucguUCAAGCACCAGCUCGAAGAAGCUuagcuaauuuaucuuagaaaauaaugaaaaagcuaugcUUCUCAAGAAGGUGCAUGAACAaguugauguauauuuugauguguaaagaccaaaauuggaucucacaugug
..(((((((...........)))))))...............((((((((.(((((.(((((..((.((.(((((.(((((..(((((...........)))))..))))).))))))).))..))))).))))).)))))))).........(((((...((((((....))).))))))))...
..(((((((...........)))))))...............((((((((.(((((.(((((..((.((.(((((.(((((..(((((...........)))))..))))).))))))).))..))))).))))).)))))))).........(((((...((((((....))).))))))))...
Structure
cuuucuauaauuacuuuuuguauagaauucacuaguugauuc c A AG C A U aa cuua
caucgacu guUCA GCACC CU GA GAAGC uagcu uuuau g
|||||||| ||||| ||||| || || ||||| ||||| ||||| a
guaguuga CAAGU CGUGG GA CU CUUcg aucga aagua a
guguacacucuagguuaaaaccagaaauguguaguuuuauau A A AA A - u aa auaa
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr2: 11159660-11159845 [+]
Database links
Mature ath-miR825-5p
| Accession | MIMAT0053861 |
| Description | Arabidopsis thaliana ath-miR825-5p mature miRNA |
| Sequence | 54 - UCAAGCACCAGCUCGAAGAAGCU - 76 |
| Evidence |
experimental
unknown |
Mature ath-miR825-3p
| Accession | MIMAT0004241 |
| Description | Arabidopsis thaliana ath-miR825-3p mature miRNA |
| Sequence | 115 - UUCUCAAGAAGGUGCAUGAACA - 136 |
| Evidence |
experimental
454 [1], cloned [2] |
References
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