Accession
MI0005383
Description
Arabidopsis thaliana
ath-MIR827 precursor miRNA
Literature search
15 open access papers mention ath-MIR827
(44 sentences)
(44 sentences)
Sequence
179319
reads,
578.0
reads per million, 173 experiments
uuccaugaaacguuauagguuuuuuucuuucucucuugcaacccuugaaugugUUUGUUGAUUGAUAUCUACACauguugaucauccuuguguugaucgauugguUUAGAUGACCAUCAACAAACUcuuucgugguuuugcaucgcuucuuggaaucucgaucauguuuuuagcauc
(((((.(((.((....(((......)))........(((((.((.((((.(.((((((((((.(.((((((.((..((((((((.........))))))))..)).)))))).).)))))))))).).)))).))..))))).)).))).)))))........(((((...))))).
(((((.(((.((....(((......)))........(((((.((.((((.(.((((((((((.(.((((((.((..((((((((.........))))))))..)).)))))).).)))))))))).).)))).))..))))).)).))).)))))........(((((...))))).
Structure
---------------------- u a uuauagguuuuuuucuuucucucu -c u u u U A C au ucc
uucca gaa cg ugcaa cc ugaa g gUUUGUUGAU G UAUCUA AC guugauca u
||||| ||| || ||||| || |||| | |||||||||| | |||||| || |||||||| u
aaggu cuu gc acguu gg gcuu c CAAACAACUA C GUAGAU ug uagcuagu g
cuacgauuuuuguacuagcucu u c -----------------------u uu u u U C A U gu ugu
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr3: 22122760-22122936 [-]
Database links
Mature ath-miR827-5p
| Accession | MIMAT0053863 |
| Description | Arabidopsis thaliana ath-miR827-5p mature miRNA |
| Sequence | 54 - UUUGUUGAUUGAUAUCUACAC - 74 |
| Evidence |
experimental
unknown |
Mature ath-miR827-3p
| Accession | MIMAT0004243 |
| Description | Arabidopsis thaliana ath-miR827-3p mature miRNA |
| Sequence | 106 - UUAGAUGACCAUCAACAAACU - 126 |
| Evidence |
experimental
454 [1-2], cloned [2], Illumina [3] |
References
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