Accession
MI0005406
Description
Arabidopsis thaliana
ath-MIR851 precursor miRNA MIR851
Gene
family?
family?
RF03702;
MIR851
Literature search
4 open access papers mention ath-MIR851
(5 sentences)
(5 sentences)
Sequence
23747
reads,
126.0
reads per million, 151 experiments
uuuucuuucuuuuccuuuucguuugauuuuggaaagcaagggacugucgUCUCGGUUCGCGAUCCACAAGUaaucuuuuguggagauuaugaaaacaaucaucacgagaggcuacgUGUGGGUGGCAAACAAAGACGAcaaucccuauuccaguuccaucagaacuugaaauaucaugugaacu
.........((((((...((....))....))))))..(((((.((((((((..(((.((.(((((((.(((.((((((((((.((((........)))).)))))))))).))).))))))).)).)))..)))))))).))))).(((.(((((.....))))).)))..............
.........((((((...((....))....))))))..(((((.((((((((..(((.((.(((((((.(((.((((((((((.((((........)))).)))))))))).))).))))))).)).)))..)))))))).))))).(((.(((((.....))))).)))..............
Structure
uuuucuuucuuuuccuuuucguuugauuuuggaaagca c CG C G A a a aug
aggga ugucgUCU GUU GC AUCCACA GUa ucuuuugugg gauu a
||||| |||||||| ||| || ||||||| ||| |||||||||| ||||
ucccu acAGCAGA CAA CG UGGGUGU cau ggagagcacu cuaa a
ucaaguguacuauaaaguucaagacuaccuugaccuua a AA A G g c a caa
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr3: 19659532-19659715 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ath-MIR851
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ath-miR851-5p
| Accession | MIMAT0004273 |
| Description | Arabidopsis thaliana ath-miR851-5p mature miRNA |
| Sequence | 50 - UCUCGGUUCGCGAUCCACAAGU - 71 |
| Evidence |
experimental
454 [1-2], cloned [2] |
Mature ath-miR851-3p
| Accession | MIMAT0004274 |
| Description | Arabidopsis thaliana ath-miR851-3p mature miRNA |
| Sequence | 117 - UGUGGGUGGCAAACAAAGACGA - 138 |
| Evidence |
experimental
454 [1] |
References
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