Stem-loop ame-mir-375

Accession

MI0005740

Description

Apis mellifera ame-mir-375 precursor miRNA

Literature search

10 open access papers mention ame-mir-375
(28 sentences)

Sequence

268456 reads, 3806.0 reads per million, 24 experiments

aucgauugaauuaucaguuuggugCAUCGAUCCUAACGAUCAACAAACUuuucacuugaaagUUUGUUCGUUCGGCUCGAGUUAucaaacugaauggaug
(((.((.......(((((((((((..((((.((.(((((...((((((((((.....))))))))))))))).)).))))..))))))))))))).))).

Structure

-   g  ugaauua           CA    U  U     UCA          c 
 auc au       ucaguuuggug  UCGA CC AACGA   ACAAACUuuu a
 ||| ||       |||||||||||  |||| || |||||   |||||||||| c
 uag ua       agucaaacuAU  AGCU GG UUGCU   UGUUUgaaag u
g   g  -------           UG    C  C     ---          u 

Annotation confidence High

Genome context

CM000059.5: 5038235-5038334 [+]

Mature ame-miR-375-5p

• Accession: MIMAT0053070
• Description: Apis mellifera ame-miR-375-5p mature miRNA
• Sequence: 25 - CAUCGAUCCUAACGAUCAACAAACU - 49
• Evidence: experimental ; Illumina [2]

Mature ame-miR-375-3p

• Accession: MIMAT0004431
• Description: Apis mellifera ame-miR-375-3p mature miRNA
• Sequence: 63 - UUUGUUCGUUCGGCUCGAGUUA - 84
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17543122
   Computational and transcriptional evidence for microRNAs in the honey bee genome
   Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG
   Genome Biol (2007) 8:R97


2. PubMed ID: 22409512
   Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
   "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
   "Genes Brain Behav (2012) 11:660-670