Accession
MI0005742
Description
Apis mellifera
ame-mir-79 precursor miRNA
Literature search
2 open access papers mention ame-mir-79
(4 sentences)
(4 sentences)
Sequence
318336
reads,
3547.0
reads per million, 24 experiments
uucaagacugucaaagcuuuugccuuuaCUUUGGUAAUAUAGCUCUAUGAuuuuaauuaaggaucAUAAAGCUAGAUUACCAAAGCAAagagcacuagca
...............(((..(((((((.((((((((((.(((((.(((((((((.....))))))))).))))).)))))))))).)))).)))..))).
...............(((..(((((((.((((((((((.(((((.(((((((((.....))))))))).))))).)))))))))).)))).)))..))).
Structure
uucaagacugucaaa uu - a A C a
gcu ugc cuuu CUUUGGUAAU UAGCU UAUGAuuuu a
||| ||| |||| |||||||||| ||||| ||||||||| u
cga acg gaAA GAAACCAUUA AUCGA AUAcuagga u
--------------a uc a C G A a
Annotation confidence
High
Do you think this miRNA is real?
Genome context
CM000066.5: 7887622-7887721 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ame-mir-79
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ame-miR-79-5p
| Accession | MIMAT0053072 |
| Description | Apis mellifera ame-miR-79-5p mature miRNA |
| Sequence | 29 - CUUUGGUAAUAUAGCUCUAUGA - 50 |
| Evidence |
experimental
RTPCR [2], Illumina [3-4] |
Mature ame-miR-79-3p
| Accession | MIMAT0004433 |
| Description | Apis mellifera ame-miR-79-3p mature miRNA |
| Sequence | 66 - AUAAAGCUAGAUUACCAAAGCAA - 88 |
| Evidence |
experimental
RTPCR [2], Illumina [3-4] |
References
|
