Stem-loop ame-mir-92a

Accession

MI0005745

Description

Apis mellifera ame-mir-92a precursor miRNA

Literature search

5 open access papers mention ame-mir-92a
(8 sentences)

Sequence

23593 reads, 304.0 reads per million, 24 experiments

uuauuuugcauagaagauAGGCCGAGAUUUGUGACAAUGUUucgugaugauguaaucuucaaUAUUGCACUUGUCCCGGCCUAUcggaaugcauuauauu
.(((..(((((....(((((((((.(((..(((.(((((((....(((......)))...))))))))))..))).)))))))))...)))))..)))..

Structure

-u   uu     agaa         A   UU   A       ucgu   ga 
  uau  ugcau    gauAGGCCG GAU  GUG CAAUGUU    gau  u
  |||  |||||    ||||||||| |||  ||| |||||||    |||   
  aua  acgua    cUAUCCGGC CUG  CAC GUUAUaa    cua  g
uu   uu     -agg         C   UU   -       -cuu   au 

Annotation confidence High

Genome context

CM000066.5: 8056052-8056151 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ame-mir-92a

Mature ame-miR-92a-5p

• Accession: MIMAT0053075
• Description: Apis mellifera ame-miR-92a-5p mature miRNA
• Sequence: 19 - AGGCCGAGAUUUGUGACAAUGUU - 41
• Evidence: experimental ; RTPCR [2], Illumina [3]

Mature ame-miR-92a-3p

• Accession: MIMAT0004435
• Description: Apis mellifera ame-miR-92a-3p mature miRNA
• Sequence: 63 - UAUUGCACUUGUCCCGGCCUAU - 84
• Evidence: experimental ; RTPCR [2], Illumina [3]

References

1. PubMed ID: 17543122
   Computational and transcriptional evidence for microRNAs in the honey bee genome
   Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG
   Genome Biol (2007) 8:R97


2. PubMed ID: 22409512
   Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
   "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
   "Genes Brain Behav (2012) 11:660-670


3. PubMed ID: 20491979
   Correlated expression patterns of microRNA genes with age-dependent behavioural changes in honeybee
   "Behura SK, Whitfield CW"
   "Insect Mol Biol (2010) 19:431-439