miRBase entry: ame-mir-928

Stem-loop ame-mir-928


Accession
MI0005749
Description
Apis mellifera ame-mir-928 precursor miRNA


Sequence

guccaguauucCUGGCUGUGGAAGCUGGCGAAcgucacccaguccccguacaguuaccuguggaccaauaccagcaccgcgccugaauuaguugcgggac
((((.((((((..(((.((((..(((((.....(((.(.(((....(.....)....))).)))).....))))).))))))).)))).....)).))))

Structure
    a  -----    CU   U    AA     CGAAc   a c   uccc g 
gucc gu     auuc  GGC GUGG  GCUGG     guc c cag    c u
|||| ||     ||||  ||| ||||  |||||     ||| | |||    | a
cagg cg     uaag  ccg cgcc  cgacc     cag g guc    g c
    g  uugau    -u   -    -a     auaac   - u   cauu a 


Annotation confidence Not enough data
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Genome context
CM000057.5: 13568496-13568595 [+]

Database links

Mature ame-miR-928-5p

Accession MIMAT0004439
Description Apis mellifera ame-miR-928-5p mature miRNA
Sequence 12 - CUGGCUGUGGAAGCUGGCGAA - 32
Evidence experimental
array [1], RTPCR [1], Illumina [2]

References

  1. PubMed ID: 17543122
    Computational and transcriptional evidence for microRNAs in the honey bee genome
    Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG
    Genome Biol (2007) 8:R97

  2. PubMed ID: 22409512
    Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
    "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
    "Genes Brain Behav (2012) 11:660-670