Stem-loop tae-MIR1120a

Accession

MI0006182

Description

Triticum aestivum tae-MIR1120a precursor miRNA

Literature search

12 open access papers mention tae-MIR1120a
(45 sentences)

Sequence

8804 reads, 45 reads per million, 115 experiments

gcggccgcccgggcagguacucccuccgucccauaauauaagaacauuuuugacaguguagugucaaaaACAUUCUUAUAUUAUGAGACGGAGggaguauuucccagcuccugaaucac
.(((..((..(((.((((((((((((((((.(((((((((((((..(((((((((......)))))))))..))))))))))))).))))))))))))))))))).))..)))......

Structure

-----g   cc  cc   c                c             ca         gu 
      cgg  gc  ggg agguacucccuccguc cauaauauaagaa  uuuuugaca  g
      |||  ||  ||| |||||||||||||||| |||||||||||||  |||||||||   
      guc  cg  ccc uuuaugaggGAGGCAG GUAUUAUAUUCUU  Aaaaacugu  u
cacuaa   cu  -a   -                A             AC         ga 

Annotation confidence Low

Comments

Yao et al. misname this sequence miR504 in [1]. miR1120 is unrelated to mammalian miR-504;

Genome context

Unknown

Mature tae-miR1120a

• Accession: MIMAT0005355
• Description: Triticum aestivum tae-miR1120a mature miRNA
• Sequence: 70 - ACAUUCUUAUAUUAUGAGACGGAG - 93
• Evidence: experimental ; cloned [1], RTPCR [1]

References

1. PubMed ID: 17543110
   Cloning and characterization of microRNAs from wheat (Triticum aestivum L.)
   Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q
   Genome Biol (2007) 8:R96