miRBase entry: tae-MIR1123

Stem-loop tae-MIR1123


Accession
MI0006185
Description
Triticum aestivum tae-MIR1123 precursor miRNA

Literature search
2 open access papers mention tae-MIR1123
(2 sentences)

Sequence

27399 reads, 295 reads per million, 116 experiments
aaaaaaauuauaugagaccaggucucauauaaaucaggugagacccgcccugaugaaugacauguggcauucacaaaucacaaagcaucuaaucucucccccccugauuucagguggggggugggguggaugcuuugugauuugugaaugacacgugucauccaucaggaugggucucaccugcuaaUCCGUGAGACCUGGUCUCAUAGAauuuuuuu
(((((((((.((((((((((((((((((......(((((((((((((.(((((((.((((((((((.((((((((((((((((((((((((.((((((((((((((....)))).)))))).)))))))))))))))))))))))))))).)))))))))).))))))).))))))))))))).......)))))))))))))))))).)))))))))

Structure
         a                  -auaaau             c       a          g                        a    -      -    a 
aaaaaaauu uaugagaccaggucucau       caggugagacccg ccugaug augacaugug cauucacaaaucacaaagcaucua ucuc uccccc ccug u
||||||||| ||||||||||||||||||       ||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||| |||| |||||| ||||  
uuuuuuuaA AUACUCUGGUCCAGAGUG       guccacucugggu ggacuac uacugugcac guaaguguuuaguguuucguaggu gggg gggggg ggac u
         G                  CCUaauc             a       c          a                        -    u      u    u 


Annotation confidence Low
Do you think this miRNA is real?
Comments
Yao et al. misname this sequence miR507 in [1]. miR1123 is unrelated to mammalian miR-507;

Genome context
5B: 186584681-186584898 [-]

Database links

Mature tae-miR1123

Accession MIMAT0005358
Description Triticum aestivum tae-miR1123 mature miRNA
Sequence 188 - UCCGUGAGACCUGGUCUCAUAGA - 210
Evidence experimental
cloned [1], Northern [1]

References

  1. PubMed ID: 17543110
    Cloning and characterization of microRNAs from wheat (Triticum aestivum L.)
    Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q
    Genome Biol (2007) 8:R96