Stem-loop tae-MIR1131

Accession

MI0006193

Description

Triticum aestivum tae-MIR1131 precursor miRNA

Literature search

3 open access papers mention tae-MIR1131
(3 sentences)

Sequence

5695 reads, 104 reads per million, 116 experiments

cauUAGUACCGGUUCGUGGCUAACCuuuagcaccgguucgugccacgaaccgguacuaaugagggugguggcaggauguugucagucugggcccccucca
.(((((((((((((((((((.((((.........))))...)))))))))))))))))))(((((.(((..((((.((....)).)))).))))))))..

Structure

---------------------------------------c                   --U    uuu 
                                        auUAGUACCGGUUCGUGGC   AACC   a
                                        |||||||||||||||||||   ||||   g
                                        uaaucauggccaagcaccg   uugg   c
accucccccgggucugacuguuguaggacgguggugggag                   ugc    cca 

Annotation confidence Low

Comments

Yao et al. misname this sequence miR515 in [1]. miR1131 is unrelated to mammalian miR-515;

Genome context

1B: 17546649-17546748 [-]

Mature tae-miR1131

• Accession: MIMAT0005366
• Description: Triticum aestivum tae-miR1131 mature miRNA
• Sequence: 4 - UAGUACCGGUUCGUGGCUAACC - 25
• Evidence: experimental ; cloned [1], Northern [1]

References

1. PubMed ID: 17543110
   Cloning and characterization of microRNAs from wheat (Triticum aestivum L.)
   Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q
   Genome Biol (2007) 8:R96