Stem-loop tae-MIR1131

Accession

MI0006193

Description

Triticum aestivum tae-MIR1131 precursor miRNA

Literature search

3 open access papers mention tae-MIR1131
(3 sentences)

Sequence

55174 reads, 1693.0 reads per million, 234 experiments

cauUAGUACCGGUUCGUGGCUAACCuuuagcaccgguucgugccacgaaccgguacuaaugagggugguggcAGGAUGUUGUCAGUCUGGGCCCCCUcca
.(((((((((((((((((((.((((.........))))...)))))))))))))))))))(((((.(((..((((.((....)).)))).))))))))..

Structure

cauUAGUACCGGUUCGUGGCUAACCuuuagcaccgguucgugccacgaaccgguacuaau     u   gg    A  U 
                                                            gaggg ggu  cAGG UG U
                                                            ||||| |||  |||| ||  
                                                            cUCCC CCG  GUCU AC G
----------------------------------------------------------ac     -   -G    G  U 

Annotation confidence Low

Comments

Yao et al. misname this sequence miR515 in [1]. miR1131 is unrelated to mammalian miR-515;

Genome context

1B: 17546649-17546748 [-]

Mature tae-miR1131-5p

• Accession: MIMAT0005366
• Description: Triticum aestivum tae-miR1131-5p mature miRNA
• Sequence: 4 - UAGUACCGGUUCGUGGCUAACC - 25
• Evidence: experimental ; cloned [1], Northern [1]

Mature tae-miR1131-3p

• Accession: MIMAT0056489
• Description: Triticum aestivum tae-miR1131-3p mature miRNA
• Sequence: 73 - AGGAUGUUGUCAGUCUGGGCCCCCU - 97
• Evidence: experimental ; unknown

References

1. PubMed ID: 17543110
   Cloning and characterization of microRNAs from wheat (Triticum aestivum L.)
   Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q
   Genome Biol (2007) 8:R96