Stem-loop tae-MIR1136

Accession

MI0006198

Description

Triticum aestivum tae-MIR1136 precursor miRNA

Literature search

11 open access papers mention tae-MIR1136
(17 sentences)

Sequence

150453 reads, 1987.0 reads per million, 235 experiments

uacucccuccguuccgaauuacUUGUCGCAGGUAUGGAUGUAUCUAgauguauuuuaguucuaaauacauccaUUUCUGCGACGAGUAAUUugaaacggagggagua
(((((((((((((.((((((((((((((((((.((((((((((.((((...........)))).)))))))))).)))))))))))))))))).)))))))))))))

Structure

             c                  U          C    ugua 
uacucccuccguu cgaauuacUUGUCGCAGG AUGGAUGUAU UAga    u
||||||||||||| |||||||||||||||||| |||||||||| ||||    u
augagggaggcaa guUUAAUGAGCAGCGUCU Uaccuacaua aucu    u
             a                  U          a    ugau 

Annotation confidence Low

Comments

Yao et al. misname this sequence miR520 in [1]. miR1136 is unrelated to mammalian miR-520;

Genome context

6A: 4711016-4711122 [+]

Mature tae-miR1136-5p

• Accession: MIMAT0005371
• Description: Triticum aestivum tae-miR1136-5p mature miRNA
• Sequence: 23 - UUGUCGCAGGUAUGGAUGUAUCUA - 46
• Evidence: experimental ; cloned [1]

Mature tae-miR1136-3p

• Accession: MIMAT0056493
• Description: Triticum aestivum tae-miR1136-3p mature miRNA
• Sequence: 74 - UUUCUGCGACGAGUAAUU - 91
• Evidence: experimental ; unknown

References

1. PubMed ID: 17543110
   Cloning and characterization of microRNAs from wheat (Triticum aestivum L.)
   Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q
   Genome Biol (2007) 8:R96