Stem-loop tae-MIR1137a

Accession

MI0006199

Description

Triticum aestivum tae-MIR1137a precursor miRNA

Literature search

8 open access papers mention tae-MIR1137a
(10 sentences)

Sequence

33556 reads, 889.0 reads per million, 231 experiments

cacgaugacgacgauuacauagccuugUACUCCCUCCGUUCCAAAAUggaugacccaaguuuguacuaaaguUAGUACAAAGUUGAGUCAUCuauucuggaacggagggaguaguaguaauacaacguugcuagugauaaggaaaauc
(((...(.((((((((((...((....((((((((((((((((...(((.....)))(((....))).................((((.....)))))))))))))))))))))).)))))....))))))..)))............

Structure

------------   gau a     ----     aua  cuug                AAAUggaugacccaaguuuguacuaaaguUAGUACAAAGUU    C 
            cac   g cgacg    auuac   gc    UACUCCCUCCGUUCCA                                         GAGU A
            |||   | |||||    |||||   ||    ||||||||||||||||                                         |||| U
            gug   c guugc    uaaug   ug    augagggaggcaaggu                                         cuua C
cuaaaaggaaua   -au -     aaca     --a  ----                -----------------------------------------    u 

Annotation confidence Low

Comments

Yao et al. misname this sequence miR521 in [1]. miR1137 is unrelated to mammalian miR-521;

Genome context

Unknown

Mature tae-miR1137a-5p

• Accession: MIMAT0056494
• Description: Triticum aestivum tae-miR1137a-5p mature miRNA
• Sequence: 28 - UACUCCCUCCGUUCCAAAAU - 47
• Evidence: experimental ; unknown

Mature tae-miR1137a-3p

• Accession: MIMAT0005372
• Description: Triticum aestivum tae-miR1137a-3p mature miRNA
• Sequence: 73 - UAGUACAAAGUUGAGUCAUC - 92
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17543110
   Cloning and characterization of microRNAs from wheat (Triticum aestivum L.)
   Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q
   Genome Biol (2007) 8:R96