Accession
MI0006201
Description
Triticum aestivum
tae-MIR1139 precursor miRNA
Literature search
7 open access papers mention tae-MIR1139
(13 sentences)
(13 sentences)
Sequence
21599
reads,
432.0
reads per million, 225 experiments
gccacaguggAGAGUAACAUACACUAGUAACAuacacauaucccuagaacuauauaacuaccuucauaguggguagcaacauaagugugguaucaugcaaagcuucauuuauuagguuauagacucAUAUUGCAUUGGGACAUGUGAUGuuauaguaacuagcuaaguuacucaaacuaccucucuccucgauguuacuauugaaguuacucccacu
.....(((((.(((((((.(.((.(((((((((.(((((.((((..(((((((((..((((((.......))))))........))))))).))((((((.......(((((......)))))......)))))).)))).)))))..(((..(((((((.....)))))))..)))..............))))))))).))).))))))))))))
.....(((((.(((((((.(.((.(((((((((.(((((.((((..(((((((((..((((((.......))))))........))))))).))((((((.......(((((......)))))......)))))).)))).)))))..(((..(((((((.....)))))))..)))..............))))))))).))).))))))))))))
Structure
gccac A A A C --------------------------------------------a a uagaacuauauaacuaccuucauaguggguagcaacauaagugugguauc agcuuca ua
agugg GAGUAAC U CA UAGUAACAu cacau uccc augcaa uuuau g
||||| ||||||| | || ||||||||| ||||| |||| |||||| |||||
ucacc cucauug a gu aucauugua GUGUA AGGG UACGUU agaua g
----- - a - u gcuccucucuccaucaaacucauugaaucgaucaaugauauuGUA C -------------------------------------------------U -AUAcuc uu
Annotation confidence
Low
Do you think this miRNA is real?
Comments
Yao et al. misname this sequence miR523 in [1]. miR1139 is unrelated to mammalian miR-523;
Genome context
6B: 157622002-157622218 [-]
Database links
Mature tae-miR1139-5p
| Accession | MIMAT0005374 |
| Description | Triticum aestivum tae-miR1139-5p mature miRNA |
| Sequence | 11 - AGAGUAACAUACACUAGUAACA - 32 |
| Evidence |
experimental
cloned [1] |
Mature tae-miR1139-3p
| Accession | MIMAT0056496 |
| Description | Triticum aestivum tae-miR1139-3p mature miRNA |
| Sequence | 127 - AUAUUGCAUUGGGACAUGUGAUG - 149 |
| Evidence |
experimental
unknown |
References
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