Stem-loop xtr-mir-320

Accession

MI0006266

Description

Xenopus tropicalis xtr-mir-320 precursor miRNA

Sequence

uuccccccugcuaagcaauuaugccaaucaacuuagugcaaucacacgcuacaguugauuguaauaaaggAAAAGCUGGGUUGAGAGGUGAcaugauuugcuggagguauaaaguuacug
......(((.(..((((((((((((..(((((((((((((((((.((......)))))))))............))))))))))..))...))))).)))))).))).............

Structure

-------uucccc   g ua     -     ---  aa          ------------       c  gc 
             ccu c  agcaa uuaug   cc  ucaacuuagu            gcaauca ac  u
             ||| |  ||||| |||||   ||  ||||||||||            ||||||| ||   
             gga g  ucguu aguac   GG  AGUUGGGUCG            uguuagu ug  a
gucauugaaauau   g --     u     AGU  AG          AAAAggaaauaa       -  ac 

Annotation confidence Not enough data

Genome context

chr7: 80077496-80077615 [+]

Mature xtr-miR-320

• Accession: MIMAT0005564
• Description: Xenopus tropicalis xtr-miR-320 mature miRNA
• Sequence: 71 - AAAAGCUGGGUUGAGAGGUGA - 91
• Evidence: not_experimental

References

1. PubMed ID: 18032731
   Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation
   "Tang GQ, Maxwell ES"
   "Genome Res (2008) 18:104-112