Stem-loop xtr-mir-375

Accession

MI0006267

Description

Xenopus tropicalis xtr-mir-375 precursor miRNA

Literature search

4 open access papers mention xtr-mir-375
(15 sentences)

Sequence

778 reads, 54.0 reads per million, 4 experiments

ccugacgccgagccugacgugcaaugcuuugugucaacguUUUGUUCGUUCGGCUCGCGUUAagcaggug
((((((((.(((((.((((.((((.((.(((...))).)).)))).)))).)))))))))....))))..

Structure

--    ----    c     u    u    u  u   u 
  ccug    acgc gagcc gacg gcaa gc uug  
  ||||    |||| ||||| |||| |||| || ||| g
  ggac    UGCG CUCGG UUGC UGUU ug aac  
gu    gaAU    -     C    U    U  c   u 

Annotation confidence Not enough data

Genome context

9: 82852076-82852145 [-]

Mature xtr-miR-375-3p

• Accession: MIMAT0005565
• Description: Xenopus tropicalis xtr-miR-375-3p mature miRNA
• Sequence: 41 - UUUGUUCGUUCGGCUCGCGUUA - 62
• Evidence: not_experimental

References

1. PubMed ID: 18032731
   Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation
   "Tang GQ, Maxwell ES"
   "Genome Res (2008) 18:104-112