miRBase entry: mmu-mir-669g

Stem-loop mmu-mir-669g


Accession
MI0006280
Symbol
MGI: Mir669g
Description
Mus musculus mmu-mir-669g precursor miRNA

Literature search
9 open access papers mention mmu-mir-669g
(12 sentences)

Sequence

18 reads, 5 reads per million, 8 experiments
caugugugcuuacuuguaugUGCAUUGUAUGUGUUGACAUGAUauacauaacauaaacacacguguaucugcaagcacacacacacaggaaaaauugcauucauuuauacguuugaaugauau
..((((((((....((((.(((((((((.((((((...(((.....))))))))).)))...)))))).))))))))))))...................(((((((......)))))))...

Structure
----------------------------------------ca        uacu    u      ---   A      GAC   A 
                                          ugugugcu    ugua gUGCAU   UGU UGUGUU   AUG U
                                          ||||||||    |||| ||||||   ||| ||||||   ||| a
                                          acacacga    acgu uaugug   aca auacaa   uac u
uauaguaaguuugcauauuuacuuacguuaaaaaggacacac        ----    c      cac   a      ---   a 


Annotation confidence Not enough data
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Genome context
chr2: 10477150-10477272 [+]
Clustered miRNAs
30 other miRNAs are < 10 kb from mmu-mir-669g
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-669g

Accession MIMAT0005832
Description Mus musculus mmu-miR-669g mature miRNA
Sequence 21 - UGCAUUGUAUGUGUUGACAUGAU - 43
Evidence experimental
454 [1]
Database links
Predicted targets

References

  1. PubMed ID: 17989215
    RNA sequence analysis defines Dicer's role in mouse embryonic stem cells
    "Calabrese JM, Seila AC, Yeo GW, Sharp PA"
    "Proc Natl Acad Sci U S A (2007) 104:18097-18102