miRBase entry: mmu-mir-1187

Stem-loop mmu-mir-1187


Accession
MI0006285
Symbol
MGI: Mir1187
Description
Mus musculus mmu-mir-1187 precursor miRNA

Literature search
11 open access papers mention mmu-mir-1187
(48 sentences)

Sequence

1565 reads, 15.0 reads per million, 139 experiments
ucauauaguauuaaaccgaacuguuuuccuuauagacacaauuuauuuuuaCACACACACACACACACAUAUauauauaUAUGUGUGUGUGUAUGUGUGUAaauaacaauguuaaaauagua
...................((((((((.......((((....(((((..((((((((.(((((((((((((((....))))))))))))))).)))))))))))))...)))))))))))).

Structure
ucauauaguauuaaaccga        ccuuaua    caau     uu        C               u 
                   acuguuuu       gaca    uuauu  uaCACACA ACACACACACAUAUa a
                   ||||||||       ||||    |||||  |||||||| |||||||||||||||  
                   ugauaaaa       uugu    aauaa  AUGUGUGU UGUGUGUGUGUAUau u
------------------a        -------    -aac     --        A               a 


Annotation confidence High
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Genome context
5: 82946791-82946912 [-]

Database links

Mature mmu-miR-1187-5p

Accession MIMAT0050693
Description Mus musculus mmu-miR-1187-5p mature miRNA
Sequence 52 - CACACACACACACACACAUAU - 72
Evidence experimental
454 [1]

Mature mmu-miR-1187-3p

Accession MIMAT0005837
Description Mus musculus mmu-miR-1187-3p mature miRNA
Sequence 80 - UAUGUGUGUGUGUAUGUGUGUA - 101
Evidence experimental
454 [1]
Database links
Predicted targets

References

  1. PubMed ID: 17989215
    RNA sequence analysis defines Dicer's role in mouse embryonic stem cells
    "Calabrese JM, Seila AC, Yeo GW, Sharp PA"
    "Proc Natl Acad Sci U S A (2007) 104:18097-18102