miRBase entry: mmu-mir-669i

Stem-loop mmu-mir-669i

Accession

MI0006288

Symbol

MGI: Mir669i

Description

Mus musculus mmu-mir-669i precursor miRNA

Literature search

10 open access papers mention mmu-mir-669i
(14 sentences)

Sequence

208 reads, 4 reads per million, 32 experiments

augugaugcccaccaauaaugugcauguguguauaguugugugcauauucauuucucuauaugacuaUGCAUAUACACACAUGCAUACaaacucacauacaggaaugacagucauauauccuuuuga
((((((.............(((((((((((((((......(((((((.((((........)))).)))))))))))))))))))))).....))))))..((((((((...))))...)))).....

Structure

-----------------------------      ugcccaccaauaa               aguugu       u    uuc 
                             auguga             ugugcauguguguau      gugcaua ucau   u
                             ||||||             |||||||||||||||      ||||||| ||||    
                             uacacu             AUACGUACACACAUA      UACGUau agua   c
aguuuuccuauauacugacaguaaggaca      --------caaaC               ------       c    uau

Annotation confidence Not enough data

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Genome context

chr2: 10517604-10517730 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from mmu-mir-669i

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mmu-miR-669i

Accession	MIMAT0005840
Description	Mus musculus mmu-miR-669i mature miRNA
Sequence	68 - UGCAUAUACACACAUGCAUAC - 88
Evidence	experimental 454 [1]
Database links
Predicted targets

References

PubMed ID: 17989215
RNA sequence analysis defines Dicer's role in mouse embryonic stem cells
"Calabrese JM, Seila AC, Yeo GW, Sharp PA"
"Proc Natl Acad Sci U S A (2007) 104:18097-18102