Stem-loop mmu-mir-669e

Accession

MI0006300

Symbol

MGI: Mir669e

Description

Mus musculus mmu-mir-669e precursor miRNA

Literature search

8 open access papers mention mmu-mir-669e
(11 sentences)

Sequence

454 reads, 39 reads per million, 64 experiments

gccugggauucaugggcuguacccuauauaugggcaggugugUGUCUUGUGUGUGCAUGUUCAUuuguguauaugaauaUGAAUAUACACACACUUACACacucaugcacacacacaca
(((((..((..(((((......)))))..))...))))).(((((...(((((((((((......(((((((((........)))))))))............))))))))))))))))

Structure

gccugggauucaugggcuguacccuauauaugggcaggug     CUU           ------UUCAUu         gaa 
                                        ugUGU   GUGUGUGCAUG            uguguauau   u
                                        |||||   |||||||||||            |||||||||    
                                        acaca   cacacacguac            ACACAUAUA   a
----------------------------------------     ---           ucaCACAUUCAC         AGU 

Annotation confidence High

Genome context

chr2: 10467495-10467613 [+]

Clustered miRNAs

19 other miRNAs are < 10 kb from mmu-mir-669e

Mature mmu-miR-669e-5p

• Accession: MIMAT0005853
• Description: Mus musculus mmu-miR-669e-5p mature miRNA
• Sequence: 43 - UGUCUUGUGUGUGCAUGUUCAU - 64
• Evidence: experimental ; 454 [1], Illumina [2]

Mature mmu-miR-669e-3p

• Accession: MIMAT0017330
• Description: Mus musculus mmu-miR-669e-3p mature miRNA
• Sequence: 80 - UGAAUAUACACACACUUACAC - 100
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


2. PubMed ID: 17989215
   RNA sequence analysis defines Dicer's role in mouse embryonic stem cells
   "Calabrese JM, Seila AC, Yeo GW, Sharp PA"
   "Proc Natl Acad Sci U S A (2007) 104:18097-18102