miRBase entry: hsa-mir-1287

Stem-loop hsa-mir-1287


Accession
MI0006349
Symbol
HGNC: MIR1287
Description
Homo sapiens hsa-mir-1287 precursor miRNA mir-1287
Gene
family?
RF02015; mir-1287

Literature search
3 open access papers mention hsa-mir-1287
(14 sentences)

Sequence

2731 reads, 76 reads per million, 114 experiments
guugugcuguccaggUGCUGGAUCAGUGGUUCGAGUCugagccuuuaaaagccaCUCUAGCCACAGAUGCAGUGAUuggagccaugacaa
((((((...(((((.(((((.(((.((((((.((((..(.((........))))))).)))))).))).))))).)))))..))))))..

Structure
--      cug     g     G   A      C    Cu a  cuu 
  guugug   uccag UGCUG AUC GUGGUU GAGU  g gc   u
  ||||||   ||||| ||||| ||| |||||| ||||  | ||    
  caguac   agguU GUGAC UAG CACCGA CUCa  c cg   a
aa      -cg     A     G   A      U    -- -  aaa 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chr10: 98395218-98395307 [-]

Disease association
hsa-mir-1287 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-1287-5p

Accession MIMAT0005878
Description Homo sapiens hsa-miR-1287-5p mature miRNA
Sequence 16 - UGCUGGAUCAGUGGUUCGAGUC - 37
Evidence experimental
Illumina [1,3], 454 [2]
Database links
Predicted targets

Mature hsa-miR-1287-3p

Accession MIMAT0026738
Description Homo sapiens hsa-miR-1287-3p mature miRNA
Sequence 55 - CUCUAGCCACAGAUGCAGUGAU - 76
Evidence experimental
Illumina [3]
Database links
Predicted targets

References

  1. PubMed ID: 18285502
    Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
    "Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA"
    "Genome Res (2008) 18:610-621

  2. PubMed ID: 19508715
    Identification and analysis of miRNAs in human breast cancer and teratoma samples using deep sequencing
    Nygaard S, Jacobsen A, Lindow M, Eriksen J, Balslev E, Flyger H, Tolstrup N, Møller S, Krogh A, Litman T
    BMC Med Genomics (2009) 2:35

  3. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45