Stem-loop hsa-mir-1289-1

Accession

MI0006350

Symbol

HGNC: MIR1289-1

Description

Homo sapiens hsa-mir-1289-1 precursor miRNA

Literature search

1 open access papers mention hsa-mir-1289-1
(1 sentences)

Sequence

230 reads, 10.0 reads per million, 57 experiments

uucucaauuuuuaguaggaauuaaaaacaaaacugguaaaUGCAGACUCUUGGUUUCCACCcccagagaaucccuaaaccgggggUGGAGUCCAGGAAUCUGCAUUuuagaaaguacccagggugauucugauaauugggaaca
(((((((((.......(((((((........(((...(((((((((.((((((.((((((((((................)))))))))).)))))).))))))))).....)))........)))))))...)))))))))..

Structure

--         uuuagua       aaaacaaa   --ggu         C      U          agagaau 
  uucucaauu       ggaauua        acu     aaaUGCAGA UCUUGG UUCCACCccc       c
  |||||||||       |||||||        |||     ||||||||| |||||| ||||||||||        
  aaggguuaa       ucuuagu        uga     uUUACGUCU AGGACC GAGGUggggg       c
ac         ----uag       gggaccca   aagau         A      U          ccaaauc 

Annotation confidence Medium

Genome context

chr20: 35453954-35454097 [-]

Mature hsa-miR-1289-1-5p

• Accession: MIMAT0050522
• Description: Homo sapiens hsa-miR-1289-1-5p mature miRNA
• Sequence: 41 - UGCAGACUCUUGGUUUCCACC - 61
• Evidence: experimental ; Illumina [1]

Mature hsa-miR-1289-3p

• Accession: MIMAT0005879
• Description: Homo sapiens hsa-miR-1289-3p mature miRNA
• Sequence: 86 - UGGAGUCCAGGAAUCUGCAUU - 106
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18285502
   Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
   "Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA"
   "Genome Res (2008) 18:610-621