Stem-loop gga-mir-1454

Accession

MI0007059

Description

Gallus gallus gga-mir-1454 precursor miRNA

Literature search

2 open access papers mention gga-mir-1454
(3 sentences)

Sequence

224080 reads, 193.0 reads per million, 228 experiments

auaguggcuauagaguguguguagggucuuaaugugaguuuucuucaaauuaaaagcauaagagcuGUACAAUGAUGAGACUUUGGCUCCcucuacugau
.......(..(((((.(.((.((((((((((.(((((((((((((........)))....)))))).))))....)))))))))))).).)))))..)..

Structure

auagugg ua     u u  g          ---a    -      ----   caa 
       c  uagag g gu uagggucuua    ugug aguuuu    cuu   a
       |  ||||| | || ||||||||||    |||| ||||||    |||    
       g  aucuc C CG GUUUCAGAGU    ACAU ucgaga    gaa   u
-----ua uc     C U  -          AGUA    G      auac   aau 

Annotation confidence Not enough data

Genome context

3: 56449342-56449441 [-]

Mature gga-miR-1454-3p

• Accession: MIMAT0007331
• Description: Gallus gallus gga-miR-1454-3p mature miRNA
• Sequence: 67 - GUACAAUGAUGAGACUUUGGCUCC - 90
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18430245
   Deep sequencing of chicken microRNAs
   Burnside J, Ouyang M, Anderson A, Bernberg E, Lu C, Meyers BC, Green PJ, Markis M, Isaacs G, Huang E, Morgan RW
   BMC Genomics (2008) 9:185