miRBase entry: gga-mir-1458

Stem-loop gga-mir-1458


Accession
MI0007063
Description
Gallus gallus gga-mir-1458 precursor miRNA

Literature search
2 open access papers mention gga-mir-1458
(5 sentences)

Sequence

1720 reads, 2.0 reads per million, 125 experiments
uuaguucagccucauuuuuuuuagaguucuggaguaucuuauugcacaaaauaugcugaggagaaaUUCCUGUGAUGCUCAUGAGAAaaauuguagagcgcuuuuacacu
.......((((((((((((((((((((((.(((((.((((...(((.......)))....)))).)))))...)).)))).))))))))))....))).)))........

Structure
-uuaguuc   -   ----          -    -  --u     a    -auu   ca 
        agc cuc    auuuuuuuua gagu uc   ggagu ucuu    gca  a
        ||| |||    |||||||||| |||| ||   ||||| ||||    |||  a
        ucg gag    uaaaAAGAGU CUCG AG   CCUUa agag    cgu  a
ucacauuu   c   augu          A    U  UGU     a    gagu   au 


Annotation confidence Not enough data
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Genome context
9: 10325215-10325322 [+]

Database links

Mature gga-miR-1458-3p

Accession MIMAT0007336
Description Gallus gallus gga-miR-1458-3p mature miRNA
Sequence 67 - UUCCUGUGAUGCUCAUGAGAA - 87
Evidence experimental
454 [1]

References

  1. PubMed ID: 18430245
    Deep sequencing of chicken microRNAs
    Burnside J, Ouyang M, Anderson A, Bernberg E, Lu C, Meyers BC, Green PJ, Markis M, Isaacs G, Huang E, Morgan RW
    BMC Genomics (2008) 9:185