Stem-loop gga-mir-1460

Accession

MI0007065

Description

Gallus gallus gga-mir-1460 precursor miRNA

Sequence

49 reads, 0.0 reads per million, 33 experiments

augcucccugcagacAAUUUAUUGCAGCCUUCUCAGGGUggcccccugcucuguucaccagggggaagguguaauaaauugccugcggggaggcuuugc
...((((((((((.((((((((((((.(((((((((((.....)))))(((((.....))))))))))))))))))))))).)))))))))).......

Structure

----aug          a            G      ---------------     U 
       cucccugcag cAAUUUAUUGCA CCUUCU               CAGGG g
       |||||||||| |||||||||||| ||||||               ||||| g
       gaggggcguc guuaaauaaugu ggaagg               guccc c
cguuucg          c            -      gggaccacuugucuc     c 

Annotation confidence Not enough data

Genome context

1: 7543504-7543600 [-]

Mature gga-miR-1460-5p

• Accession: MIMAT0007338
• Description: Gallus gallus gga-miR-1460-5p mature miRNA
• Sequence: 16 - AAUUUAUUGCAGCCUUCUCAGGGU - 39
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18430245
   Deep sequencing of chicken microRNAs
   Burnside J, Ouyang M, Anderson A, Bernberg E, Lu C, Meyers BC, Green PJ, Markis M, Isaacs G, Huang E, Morgan RW
   BMC Genomics (2008) 9:185