Stem-loop gga-mir-1464

Accession

MI0007069

Description

Gallus gallus gga-mir-1464 precursor miRNA

Literature search

2 open access papers mention gga-mir-1464
(3 sentences)

Sequence

327 reads, 1.0 reads per million, 94 experiments

ggcgcagcaccugcguguguggcugUGCUGUUUGCAGGGCCGCCUCGGAuccgcccaacgcCGGCUGCCCGCACACAGCACACacagcacacagcacacgcgugcagcgc
.((((.((((..(((((((((((((((((((.(((.((((.(((.((...........))..))).))))))).)))))....))))).)...)))))))))))).))))

Structure

g    a    cu        --- -     ----     U   A    C   -U  GAuc 
 gcgc gcac  gcgugugu   g gcugU    GCUGU UGC GGGC GCC  CG    c
 |||| ||||  ||||||||   | |||||    ||||| ||| |||| |||  ||    g
 cgcg cgug  cgcacacg   c cgaca    CGACA ACG CCCG CGG  gc    c
-    a    --        aca a     CACA     C   -    U   Cc  aacc 

Annotation confidence Medium

Genome context

15: 11441472-11441581 [+]

Mature gga-miR-1464-5p

• Accession: MIMAT0007342
• Description: Gallus gallus gga-miR-1464-5p mature miRNA
• Sequence: 26 - UGCUGUUUGCAGGGCCGCCUCGGA - 49
• Evidence: experimental ; 454 [1]

Mature gga-miR-1464-3p

• Accession: MIMAT0051227
• Description: Gallus gallus gga-miR-1464-3p mature miRNA
• Sequence: 62 - CGGCUGCCCGCACACAGCACAC - 83
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18430245
   Deep sequencing of chicken microRNAs
   Burnside J, Ouyang M, Anderson A, Bernberg E, Lu C, Meyers BC, Green PJ, Markis M, Isaacs G, Huang E, Morgan RW
   BMC Genomics (2008) 9:185