Stem-loop odi-mir-1468

Accession

MI0007079

Description

Oikopleura dioica odi-mir-1468 precursor miRNA

Sequence

gaagaugaguaaaauUAAGGCGAGAUGAGGUCUUUGGACAguuaauuaaugaccgaugaccuaccgccucaauuuaacuugcucuaaauucgacagagagauuuu
(((...((((((((((.(((((.(...(((((.((((.((.........)).)))).))))).)))))).))))....))))))....)))..............

Structure

--------------   -gau      ----    A     A AUG     U    A  guu 
              gaa    gaguaa    aauU AGGCG G   AGGUC UUGG CA   a
              |||    ||||||    |||| ||||| |   ||||| |||| ||   a
              cuu    cucguu    uuaa uccgc c   uccag agcc gu   u
uuuuagagagacag   aaau      caau    c     - --a     u    a  aau 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1468

• Accession: MIMAT0006019
• Description: Oikopleura dioica odi-miR-1468 mature miRNA
• Sequence: 16 - UAAGGCGAGAUGAGGUCUUUGGACA - 40
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080