Stem-loop odi-mir-1470

Accession

MI0007081

Description

Oikopleura dioica odi-mir-1470 precursor miRNA

Sequence

aaagugaugcgaugaCACACCUUAACACCAGUGCGCUGAaggggauccaauauaacaaacccuuccgcggacagguguuaggugaaucuucacguugcaacuuu
...((((((.((.((..(((((.((((((.((.(((.((((((................)))))).))).)).)))))))))))..)).)).))))))......

Structure

---aaa      c  u  CA     U      A  G   U      gauccaa 
      gugaug ga ga  CACCU AACACC GU CGC GAaggg       u
      |||||| || ||  ||||| |||||| || ||| ||||||        
      cguugc cu cu  gugga uugugg ca gcg cuuccc       a
uuucaa      a  u  aa     -      a  g   c      aaacaau 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1470

• Accession: MIMAT0006021
• Description: Oikopleura dioica odi-miR-1470 mature miRNA
• Sequence: 16 - CACACCUUAACACCAGUGCGCUGA - 39
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080