Stem-loop odi-mir-1471

Accession

MI0007082

Description

Oikopleura dioica odi-mir-1471 precursor miRNA

Sequence

uuaacuugaauagaaUCACCUUGGUAUCAAAAUUUGCGcugcuggaaauuaaauaaauuguuaacagacaaguuuugauacaagguaacucgaaacaaguuac
.(((((((....((...((((((.((((((((((((..(((.(((.((((.....)))).))).))).))))))))))))))))))...))....))))))).

Structure

u       aaua  aUC      G            CG   c   a    a 
 uaacuug    ga   ACCUUG UAUCAAAAUUUG  cug ugg aauu a
 |||||||    ||   |||||| ||||||||||||  ||| ||| |||| a
 auugaac    cu   uggaac auaguuuugaac  gac auu uuaa u
c       aaag  caa      -            -a   a   g    a 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1471

• Accession: MIMAT0006022
• Description: Oikopleura dioica odi-miR-1471 mature miRNA
• Sequence: 16 - UCACCUUGGUAUCAAAAUUUGCG - 38
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080