Stem-loop odi-mir-1474

Accession

MI0007085

Description

Oikopleura dioica odi-mir-1474 precursor miRNA

Sequence

aaugcaauugaaaaaUGUCAGGACUGAGGUUGUGCUUgagcuuuaauugagcauaaucacgcucuugauuuuugucauuguaaaagcucgacgaguaaaccc
..((((((.((.(((.(((((((.((.((((((((((((.......)))))))))))).)).))))))).))).))))))))...((((...))))......

Structure

------------------aa      u  a   U       C  A            gc 
                    ugcaau ga aaa GUCAGGA UG GGUUGUGCUUga  u
                    |||||| || ||| ||||||| || ||||||||||||  u
                    auguua cu uuu uaguucu gc cuaauacgaguu  u
cccaaaugagcagcucgaaa      -  g   u       c  a            aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1474

• Accession: MIMAT0006025
• Description: Oikopleura dioica odi-miR-1474 mature miRNA
• Sequence: 16 - UGUCAGGACUGAGGUUGUGCUU - 37
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080