Stem-loop odi-mir-1479

Accession

MI0007090

Description

Oikopleura dioica odi-mir-1479 precursor miRNA

Sequence

gucgcgagguggagaCAACGAGUCCUUGAAAUUACCGGcugagaacagaaaauaaccacucagcugguauaucaggaucguuuccugcauccgugagcacucg
.(((((.((((.((..(((((.((((.((...(((((((((((...............)))))))))))..)))))))))))..)).))))))))).......

Structure

------g     a    g  aC     G    U  AAU           aacaga 
       ucgcg ggug ag  AACGA UCCU GA   UACCGGcugag      a
       ||||| |||| ||  ||||| |||| ||   |||||||||||      a
       agugc cuac uc  uugcu agga cu   auggucgacuc      a
gcucacg     -    g  cu     -    -  -au           accaau 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1479

• Accession: MIMAT0006031
• Description: Oikopleura dioica odi-miR-1479 mature miRNA
• Sequence: 16 - CAACGAGUCCUUGAAAUUACCGG - 38
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080