Stem-loop odi-mir-1480

Accession

MI0007091

Description

Oikopleura dioica odi-mir-1480 precursor miRNA

Sequence

ucuucuuguugacucGGUGGCUCAUUCUCGGCUUGUGUCagaauuauugcugauccgaaaugaucgugaucagaaggauaaaaaugauaacaagcauucuagaa
..............................((((((((((...(((((.(((((((((.....))).))))))...)))))...)))).)))))).........

Structure

ucuucuuguugacucGGUGGCUCAUUCUCG      -    gaa     --g      -   a 
                              GCUUGU GUCa   uuauu   cugauc cga a
                              |||||| ||||   |||||   |||||| ||| u
                              cgaaca uagu   aauag   gacuag gcu g
---------------------aagaucuua      a    aaa     gaa      u   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1480

• Accession: MIMAT0006032
• Description: Oikopleura dioica odi-miR-1480 mature miRNA
• Sequence: 16 - GGUGGCUCAUUCUCGGCUUGUGUC - 39
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080