Stem-loop odi-mir-1483

Accession

MI0007094

Description

Oikopleura dioica odi-mir-1483 precursor miRNA

Sequence

caacccaguuucucgCGGCAGUGAGUCGAUAGCGCCCUUUcggcguaucuagaaaauuuucgaaAGGGCCAUCGCCUAUAUCUGCCCAaagaaacugggaaua
...((((((((((...(((((..((.((((.(.((((((((((................))))))))))))))).))....)))))...))))))))))....

Structure

-caa          cgC     --UG  U    A C          cguaucu 
    cccaguuucu   GGCAG    AG CGAU G GCCCUUUcgg       a
    ||||||||||   |||||    || |||| | ||||||||||        
    gggucaaaga   CCGUC    UC GCUA C CGGGAaagcu       g
auaa          aAC     UAUA  C    - -          uuuaaaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1483-5p

• Accession: MIMAT0006035
• Description: Oikopleura dioica odi-miR-1483-5p mature miRNA
• Sequence: 16 - CGGCAGUGAGUCGAUAGCGCCCUUU - 40
• Evidence: experimental ; cloned [1]

Mature odi-miR-1483-3p

• Accession: MIMAT0006036
• Description: Oikopleura dioica odi-miR-1483-3p mature miRNA
• Sequence: 65 - AGGGCCAUCGCCUAUAUCUGCCCA - 88
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080