Stem-loop odi-mir-1484

Accession

MI0007095

Description

Oikopleura dioica odi-mir-1484 precursor miRNA

Sequence

ucgcagggaccggucgaccauaaugcguuguuugaccuuuuggcuggcugaagccaggaacgggUGAAACUUCGUAGAUUUGGUCACUcggcucuagaucgag
((..((((.(((((.(((((...((((..((((.(((((((((((......)))))))...)))).))))..))))....))))))).))))))).)).....

Structure

-----  gc    a   -  c     -uaa    uu    g    ---       gg 
     uc  aggg ccg gu gacca    ugcg  guuu accu   uuuggcu  c
     ||  |||| ||| || |||||    ||||  |||| ||||   |||||||   
     ag  ucuc ggc CA CUGGU    AUGC  CAAA Uggg   ggaccga  u
gagcu  -a    -   U  -     UUAG    UU    G    caa       ag 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1484

• Accession: MIMAT0006037
• Description: Oikopleura dioica odi-miR-1484 mature miRNA
• Sequence: 65 - UGAAACUUCGUAGAUUUGGUCACU - 88
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080