Stem-loop odi-mir-1486

Accession

MI0007097

Description

Oikopleura dioica odi-mir-1486 precursor miRNA

Sequence

cuuaaccgguugccaCUAGGUGGUUUUUUCGAUGAAGGUgcccaguaaacuggguacccucccgaauuaaaacacuuacuauuuauagugauaaaaaauuuuau
.............(((((((((.((..((((..((.(((((((((....))))))))).)).))))..))..)))).........)))))..............

Structure

-cuuaaccgguugc     ---------    -G  UU    AU  A         u 
              caCUA         GGUG  UU  UUCG  GA GGUgcccag a
              |||||         ||||  ||  ||||  || |||||||||  
              gugau         ucac  aa  aagc  cu ccauggguc a
uauuuuaaaaaaua     auuuaucau    aa  uu    -c  c         a 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1486

• Accession: MIMAT0006039
• Description: Oikopleura dioica odi-miR-1486 mature miRNA
• Sequence: 16 - CUAGGUGGUUUUUUCGAUGAAGGU - 39
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080