Stem-loop odi-mir-1487

Accession

MI0007098

Description

Oikopleura dioica odi-mir-1487 precursor miRNA

Sequence

acacgagcgccagacUGGCAGUGGGGACAAGUUUAGGcccugaggcggauugaaaaaugccccaaggccugggcccacuucuugacuggccccgugacaaac
.((((.(.(((((.(.((.((((((......((((((((.((.((((..........)))).)).)))))))))))))).)).).)))))).))))......

Structure

-----a    a c     a U  C      GACAAG        c  a    gauu 
      cacg g gccag c GG AGUGGG      UUUAGGcc ug ggcg    g
      |||| | ||||| | || ||||||      |||||||| || ||||     
      gugc c cgguc g uc ucaccc      ggguccgg ac ccgu    a
caaaca    c -     a u  u      ------        a  c    aaaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1487

• Accession: MIMAT0006040
• Description: Oikopleura dioica odi-miR-1487 mature miRNA
• Sequence: 16 - UGGCAGUGGGGACAAGUUUAGG - 37
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080