Stem-loop odi-mir-1489

Accession

MI0007099

Description

Oikopleura dioica odi-mir-1489 precursor miRNA

Sequence

ugagcuguuguuagaUAGGUAAACCACGGAUUGCUUAuugaaaaagauaguaagccgucccuggaauaucuucccuaacacgugcuucuauucgacuaucuu
.(((((((.(((((..(((((..(((.((((.((((((((.......)))))))).)))).)))..)))))...)))))))).))))...............

Structure

--------------u    -   u     -aU     AA   C    U        aa 
               gagc ugu guuag   AGGUA  CCA GGAU GCUUAuug  a
               |||| ||| |||||   |||||  ||| |||| ||||||||  a
               uucg gca caauc   ucuau  ggu ccug cgaaugau  a
uucuaucagcuuauc    u   -     ccu     aa   c    c        ag 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1489

• Accession: MIMAT0006041
• Description: Oikopleura dioica odi-miR-1489 mature miRNA
• Sequence: 16 - UAGGUAAACCACGGAUUGCUUA - 37
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080