Stem-loop odi-mir-1493-2

Accession

MI0007106

Description

Oikopleura dioica odi-mir-1493-2 precursor miRNA

Sequence

uugagaucaaggaugAGAACUGUCUGAAUGGUUGGCagucggaaauuuuaauuuauaccgacgccagcuaugcacacaguuuaaauucgagaucuaccac
...(((((..((((..(((((((.((.(((((((((.(((((...............)))))))))))))).)).)))))))..))))..))))).....

Structure

--uug     aa    gA       C  A         a     aaauuu 
     agauc  ggau  GAACUGU UG AUGGUUGGC gucgg      u
     |||||  ||||  ||||||| || ||||||||| |||||      a
     ucuag  cuua  uuugaca ac uaucgaccg cagcc      a
cacca     ag    aa       c  g         -     auauuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1493

• Accession: MIMAT0006046
• Description: Oikopleura dioica odi-miR-1493 mature miRNA
• Sequence: 16 - AGAACUGUCUGAAUGGUUGGC - 36
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080