Stem-loop odi-mir-1496

Accession

MI0007109

Description

Oikopleura dioica odi-mir-1496 precursor miRNA

Sequence

caggcagcgauuugaUAGCAGUGAGAGUUUAGCAUUCGCAACauuuuuuacuguugcgaugcugcuaacugcuuuugaguuacugucacuaucgacgacggauaacu
..(((((.(((((((.((((((.((....((((((.(((((((........))))))))))))))).)))))).))))))).)))))..((((.......))))...

Structure

------------------ca     c       U      G  AGUU      U       uuu 
                    ggcag gauuuga AGCAGU AG    UAGCAU CGCAACa   u
                    ||||| ||||||| |||||| ||    |||||| |||||||    
                    cuguc uugaguu ucguca uc    gucgua gcguugu   u
ucaauaggcagcagcuauca     a       u      a  ----      -       cau 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1496

• Accession: MIMAT0006049
• Description: Oikopleura dioica odi-miR-1496 mature miRNA
• Sequence: 16 - UAGCAGUGAGAGUUUAGCAUUCGCAAC - 42
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080