Stem-loop odi-mir-1498

Accession

MI0007120

Description

Oikopleura dioica odi-mir-1498 precursor miRNA

Sequence

cuggcgauuuugcgaAGGAAUGUAGAAUUAGGAAUUCGGauagcuguuuauaaauagaugcuuucgaauuucaauuuucauucucccgcaaggucagccacaga
.(((((((((((((..((((((.((((((.((((((((((.(((.(((((....))))))))))))))))))))))))))))))..))))))))).))))....

Structure

---c    -         aA      U      A          u   u     u 
    uggc gauuuugcg  GGAAUG AGAAUU GGAAUUCGGa agc guuua a
    |||| |||||||||  |||||| |||||| |||||||||| ||| |||||  
    accg cuggaacgc  ucuuac uuuuaa cuuuaagcuu ucg uagau a
agac    a         cc      -      -          -   -     a 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1498

• Accession: MIMAT0006058
• Description: Oikopleura dioica odi-miR-1498 mature miRNA
• Sequence: 16 - AGGAAUGUAGAAUUAGGAAUUCGG - 39
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080