Stem-loop odi-mir-1499

Accession

MI0007121

Description

Oikopleura dioica odi-mir-1499 precursor miRNA

Sequence

cggcucgcgucgaggCACACCUUUACCAGUGCGCUGGagcgaaucgaaccugaaccagccgcaucgguuaaggugccacucgaccguaggaauaucauugua
...((((.((((((...((((((.(((.(((((((((..((.........))..)))).))))).))).))))))...)))))))).)).............

Structure

----------cgg  -  c      gCA      U   A     -    ag  aau 
             cu cg gucgag   CACCUU ACC GUGCG CUGG  cg   c
             || || ||||||   |||||| ||| ||||| ||||  ||   g
             ga gc cagcuc   guggaa ugg uacgc gacc  gu   a
auguuacuauaag  u  -      acc      u   c     c    aa  cca 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1499

• Accession: MIMAT0006059
• Description: Oikopleura dioica odi-miR-1499 mature miRNA
• Sequence: 16 - CACACCUUUACCAGUGCGCUGG - 37
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080