Stem-loop odi-mir-1500

Accession

MI0007122

Description

Oikopleura dioica odi-mir-1500 precursor miRNA

Sequence

aucuucauugcauuauuuuuaaucaacugcgugaucuuauucaagucuuuggaauaauuugaaacUUGAUAAGACUGUCAUUGAUGAaaauuuauguaaccu
.......((((((.(((((((.((((..(((.(.((((((.(((((.((((((....)))))))))))))))))))))..)))))))))))..))))))...

Structure

aucuuca      -u       a    cu   u a      u     c      a 
       uugcau  auuuuua ucaa  gcg g ucuuau caagu uuugga u
       ||||||  ||||||| ||||  ||| | |||||| ||||| ||||||  
       aaugua  uaaaAGU AGUU  UGU C AGAAUA GUUca aaguuu a
----ucc      uu       -    AC   - -      -     -      a 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1500

• Accession: MIMAT0006060
• Description: Oikopleura dioica odi-miR-1500 mature miRNA
• Sequence: 66 - UUGAUAAGACUGUCAUUGAUGA - 87
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080