Stem-loop odi-mir-1501

Accession

MI0007123

Description

Oikopleura dioica odi-mir-1501 precursor miRNA

Sequence

ugacgauuccgcgaccagcugagucuuugagaguagagcauggaucgagcggacguucugcuuucUAUGCUGUACUGCAAAGGCUCCggugggauagcgcgg
........(((((.(((.(.(((((((((..((((.((((((((..(((((((...))))))))))))))).)))).))))))))).).))).....)))))

Structure

ugacgauu     ----a   g u         ag    g        uc       c 
        ccgcg     cca c gagucuuug  agua agcaugga  gagcgga  
        |||||     ||| | |||||||||  |||| ||||||||  ||||||| g
        ggcgc     ggu g CUCGGAAAC  UCAU UCGUAUcu  uucgucu  
--------     gauag   g C         -G    G        --       u 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1501

• Accession: MIMAT0006061
• Description: Oikopleura dioica odi-miR-1501 mature miRNA
• Sequence: 66 - UAUGCUGUACUGCAAAGGCUCC - 87
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080