Stem-loop odi-mir-1506

Accession

MI0007128

Description

Oikopleura dioica odi-mir-1506 precursor miRNA

Sequence

uugagaacucgccuuUGGCAGUACCUAAGUCCCUGAgcucuaaaaaugaucagagacuuuucuuacugccucaggcugguaccucaccuucgacgaagcua
.((((.(((.((((..(((((((...(((((.((((..((.......)))))).)))))....)))))))..)))).)))..)))).((((...))))...

Structure

--------------u    -a   c    uU       -CCU     C    gc  ua 
               ugag  acu gccu  GGCAGUA    AAGUC CUGA  uc  a
               ||||  ||| ||||  |||||||    ||||| ||||  ||  a
               acuc  ugg cgga  ccgucau    uucag gacu  ag  a
aucgaagcagcuucc    ca   u    cu       ucuu     a    --  ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1506

• Accession: MIMAT0006066
• Description: Oikopleura dioica odi-miR-1506 mature miRNA
• Sequence: 16 - UGGCAGUACCUAAGUCCCUGA - 36
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080