Stem-loop odi-let-7c

Accession

MI0007138

Description

Oikopleura dioica odi-let-7c precursor miRNA

Sequence

aggacuaguucugcAUGAGGUAGUAGGUUAUGCUGUucggaaaauaauauaaacgguaacagcguaaaaugcgccucuccagaacucaguccauauucgaca
.((((((((((((...(((((.(((..((((((((((((..............)))..)))))))))..))))))))..))))))).)))))..........

Structure

---------a     -       cAU     A   GG         --   gaaaau 
          ggacu aguucug   GAGGU GUA  UUAUGCUGU  ucg      a
          ||||| |||||||   ||||| |||  |||||||||  |||       
          ccuga ucaagac   cuccg cgu  aaugcgaca  ggc      a
acagcuuaua     c       -cu     -   aa         au   aaauau 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-let-7c

• Accession: MIMAT0006076
• Description: Oikopleura dioica odi-let-7c mature miRNA
• Sequence: 15 - AUGAGGUAGUAGGUUAUGCUGU - 36
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080