Stem-loop odi-mir-92a

Accession

MI0007143

Description

Oikopleura dioica odi-mir-92a precursor miRNA

Sequence

acaguaauacuugguugagauucuaggucuagucagaguggguuuacagacgauuuuuauaucugUAUUGCACUCGUCCCGGCCUUGgaauacuuuaacua
...........((((((((((((((((((..(.(.(((((.(..((((((..((....)).)))))).).)))))).)..)))).)))))).).)))))))

Structure

acaguaauacu       - -      -    ua u a     g uu      cg  u 
           ugguuga g auucua gguc  g c gagug g  uacaga  au u
           ||||||| | |||||| ||||  | | ||||| |  ||||||  ||  
           aucaauu c uaagGU CCGG  C G CUCAC U  AUgucu  ua u
-----------       u a      U    CC U -     G -U      -a  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-92a

• Accession: MIMAT0006080
• Description: Oikopleura dioica odi-miR-92a mature miRNA
• Sequence: 66 - UAUUGCACUCGUCCCGGCCUUG - 87
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080