miRBase entry: cin-mir-155

Stem-loop cin-mir-155


Accession
MI0007170
Description
Ciona intestinalis cin-mir-155 precursor miRNA


Sequence

gguugagauugaaugUUAAUGCUAAUAGUGAUAGGGuucauaaaccuuauaaaguuuauuaauauuccaaaaucacucaaaaugccaccaauaguuuucuc
(((((((((((((((((((((..(((....((((((((....))))))))...))))))))))))))...))))..)))....)))...............

Structure
---------------   ----   --    ---           CU   AGUG        c 
               ggu    uga  gauu   gaaugUUAAUG  AAU    AUAGGGuu a
               |||    |||  ||||   |||||||||||  |||    ||||||||  
               ccg    acu  cuaa   cuuauaauuau  uug    uauuccaa u
cucuuuugauaacca   uaaa   ca    aac           --   -aaa        a 


Annotation confidence Not enough data
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Genome context
4q: 2177777-2177877 [-]

Database links

Mature cin-miR-155

Accession MIMAT0006105
Description Ciona intestinalis cin-miR-155 mature miRNA
Sequence 16 - UUAAUGCUAAUAGUGAUAGGG - 36
Evidence not_experimental

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080