Stem-loop cin-mir-155

Accession

MI0007170

Description

Ciona intestinalis cin-mir-155 precursor miRNA

Literature search

2 open access papers mention cin-mir-155
(13 sentences)

Sequence

gguugagauugaaugUUAAUGCUAAUAGUGAUAGGGuucauaaaccuuauaaaguuuauuaauauuccaaaaucacucaaaaugccaccaauaguuuucuc
(((((((((((((((((((((..(((....((((((((....))))))))...))))))))))))))...))))..)))....)))...............

Structure

---------------   ----   --    ---           CU   AGUG        c 
               ggu    uga  gauu   gaaugUUAAUG  AAU    AUAGGGuu a
               |||    |||  ||||   |||||||||||  |||    ||||||||  
               ccg    acu  cuaa   cuuauaauuau  uug    uauuccaa u
cucuuuugauaacca   uaaa   ca    aac           --   -aaa        a 

Annotation confidence Not enough data

Genome context

ref|NC_020169.1|: 2251849-2251949 [-]

Mature cin-miR-155-5p

• Accession: MIMAT0006105
• Description: Ciona intestinalis cin-miR-155-5p mature miRNA
• Sequence: 16 - UUAAUGCUAAUAGUGAUAGGG - 36
• Evidence: not_experimental

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080