miRBase entry: cin-mir-217

Stem-loop cin-mir-217


Accession
MI0007177
Description
Ciona intestinalis cin-mir-217 precursor miRNA


Sequence

6786 reads, 2494 reads per million, 2 experiments
auaguugucgugauuUACUGCAUUAGGAACUGAUUGGuccaaaaaccuccaaucauauccuugugcauuauauuucgggaacgacucacuucaaaguuaaaca
..(((((((.(((..((.(((((.((((..(((((((...........)))))))..)))).)))))...))..))).).)))))).................

Structure
---------------au      - g   uu  --C     U    AC       ucca 
                 aguugu c uga  UA   UGCAU AGGA  UGAUUGG    a
                 |||||| | |||  ||   ||||| ||||  |||||||    a
                 ucagca g gcu  au   acgug uccu  acuaacc    a
acaaauugaaacuucac      a g   uu  auu     u    au       ucca 


Annotation confidence High
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cin-miR-217

Accession MIMAT0006112
Description Ciona intestinalis cin-miR-217 mature miRNA
Sequence 16 - UACUGCAUUAGGAACUGAUUGG - 37
Evidence not_experimental

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080