Stem-loop cin-mir-672

Accession

MI0007180

Description

Ciona intestinalis cin-mir-672 precursor miRNA

Sequence

acauugauggagauaUGAGUUUGGUGUACUGUGUGUUgcaugucgucaagcauccaauggcucgacuugcccgacaucccacaacggguucaugguuucaa
.......(((((.((((((((((.(((...((((...(((.((((...(((........))))))).)))...))))...))).)))))))))).))))).

Structure

acauuga     a          G   ACU    GUU   u    uca   auc 
       uggag uaUGAGUUUG UGU   GUGU   gca gucg   agc   c
       ||||| |||||||||| |||   ||||   ||| ||||   |||    
       acuuu guacuugggc aca   uaca   cgu cagc   ucg   a
------a     g          a   ccc    gcc   u    ---   gua 

Annotation confidence Not enough data

Genome context

Unknown

Mature cin-miR-672

• Accession: MIMAT0006115
• Description: Ciona intestinalis cin-miR-672 mature miRNA
• Sequence: 16 - UGAGUUUGGUGUACUGUGUGUU - 37
• Evidence: not_experimental

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080